Jacques Beckmann

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http://www.unil.ch/dgm/page18809_en.html

Articles in Scholarly Journals [Incomplete List]

  1. A modular approach for integrative analysis of large-scale gene-expression and drug-response data
    Nature Biotechnology, vol. 26, no. 5, Article ID nbt1397, 8 pages, 2008
  2. Genome-wide association analysis identifies 20 loci that influence adult height
    Nature Genetics, vol. 40, no. 5, Article ID ng.121, 8 pages, 2008
  3. IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 5, no. 1, pp. 101–109, 2008
  4. Premature termination codons in PRPF31 cause retinitis pigmentosa via haploinsufficiency due to nonsense-mediated mRNA decay
    Journal of Clinical Investigation, vol. 118, no. 4, pp. 1519–1531, 2008
  5. In Vitro Whole-Genome Analysis Identifies a Susceptibility Locus for HIV-1
    PLoS Biology, vol. 6, no. 2, p. e32, 2008
  6. Blocking Apoptotic Intracellular Signaling Cascades with Cell-Permeable Peptides
    Current Signal Transduction Therapy, vol. 2, no. 2, pp. 175–179, 2007
  7. AHI1, a pivotal neurodevelopmental gene, and C6orf217 are associated with susceptibility to schizophrenia
    European Journal of Human Genetics, vol. 15, no. 3, Article ID 5201794, 1 pages, 2007
  8. Genome-wide prediction of matrix attachment regions that increase gene expression in mammalian cells
    Nature Methods, vol. 4, no. 9, Article ID nmeth1076, 6 pages, 2007
  9. Copy number variants and genetic traits: closer to the resolution of phenotypic to genotypic variability
    Nature Reviews Genetics, vol. 8, no. 8, Article ID nrg2149, 7 pages, 2007
  10. SREBP-1c expression in Schwann cells is affected by diabetes and nutritional status
    Molecular and Cellular Neuroscience, vol. 35, no. 4, pp. 525–534, 2007
  11. Molecular and cellular basis of calpainopathy (limb girdle muscular dystrophy type 2A)
    Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease, vol. 1772, no. 2, pp. 128–144, 2007
  12. Cell-permeable peptides induce dose- and length-dependent cytotoxic effects
    Biochimica et Biophysica Acta (BBA) - Biomembranes, vol. 1768, no. 9, pp. 2222–2234, 2007
  13. The association of DNA sequence variation at the MAOA genetic locus with quantitative behavioural traits in normal males
    Human Genetics, vol. 120, no. 4, pp. 447–459, 2006
  14. Fetus with two identical reciprocal translocations: Description of a rare complication of consanguinity
    American Journal of Medical Genetics Part A, vol. 140A, no. 7, pp. 769–774, 2006
  15. Identification of putativein vivo substrates of calpain 3 by comparative proteomics of overexpressing transgenic and nontransgenic mice
    PROTEOMICS, vol. 6, no. 22, pp. 6075–6084, 2006
  16. Mendelian disorders deserve more attention
    Nature Reviews Genetics, vol. 7, no. 4, Article ID nrg1826, 5 pages, 2006
  17. A unique set of SH3–SH3 interactions controls IB1 homodimerization
    The EMBO Journal, vol. 25, no. 4, Article ID 7600982, 12 pages, 2006
  18. AHI1, a pivotal neurodevelopmental gene, and C6orf217 are associated with susceptibility to schizophrenia
    European Journal of Human Genetics, vol. 14, no. 10, Article ID 5201675, 8 pages, 2006
  19. Myotilin is not the Causative Gene for Vocal Cord and Pharyngeal Weakness with Distal Myopathy (VCPDM)
    Annals of Human Genetics, vol. 70, no. 3, pp. 414–416, 2006
  20. Homogeneous and Nonradioactive High-Throughput Screening Platform for the Characterization of Kinase Inhibitors in Cell Lysates
    Journal of Biomolecular Screening, vol. 11, no. 8, pp. 1015–1026, 2006
  21. Use of a Combined Ex Vivo/In Vivo Population Approach for Screening of Human Genes Involved in the Human Immunodeficiency Virus Type 1 Life Cycle for Variants Influencing Disease Progression
    Journal of Virology, vol. 79, no. 20, pp. 12674–12680, 2005
  22. Analysis of Genetic Polymorphisms in Acetylcholinesterase as Reflected in Different Populations
    Current Alzheimer Research, vol. 2, no. 2, pp. 207–218, 2005
  23. Identification of C7orf11 (TTDN1) Gene Mutations and Genetic Heterogeneity in Nonphotosensitive Trichothiodystrophy
    The American Journal of Human Genetics, vol. 76, no. 3, pp. 510–516, 2005
  24. FoldIndex(C): a simple tool to predict whether a given protein sequence is intrinsically unfolded
    Bioinformatics, vol. 21, no. 16, pp. 3435–3438, 2005
  25. Fine mapping of a schizophrenia susceptibility locus at chromosome 6q23: increased evidence for linkage and reduced linkage interval
    European Journal of Human Genetics, vol. 13, no. 6, Article ID 5201406, 8 pages, 2005
  26. Typing without calling the allele: a strategy for inferring SNP haplotypes
    European Journal of Human Genetics, vol. 13, no. 8, Article ID 5201440, 3 pages, 2005
  27. The trace amine receptor 4 gene is not associated with schizophrenia in a sample linked to chromosome 6q23
    Molecular Psychiatry, vol. 11, no. 2, Article ID 4001752, 2 pages, 2005
  28. On ubiquitin ligases and cancer
    Human Mutation, vol. 25, no. 6, pp. 507–512, 2005
  29. A paradigm for single nucleotide polymorphism analysis: The case of the acetylcholinesterase gene
    Human Mutation, vol. 24, no. 5, pp. 408–416, 2004
  30. Circadian regulation of islet genes involved in insulin production and secretion
    Molecular and Cellular Endocrinology, vol. 226, no. 1-2, pp. 59–66, 2004
  31. Genomic profiling of interpopulation diversity guides prioritization of candidate-genes for autoimmunity
    Genes and Immunity, vol. 5, no. 6, Article ID 6364117, 11 pages, 2004
  32. Recovering Frequencies of Known Haplotype Blocks From Single-Nucleotide Polymorphism Allele Frequencies
    Genetics, vol. 166, no. 4, pp. 2001–2006, 2004
  33. Intracellular Stress Signaling Pathways Activated During Human Islet Preparation and Following Acute Cytokine Exposure
    Diabetes, vol. 53, no. 11, pp. 2815–2823, 2004
  34. HLA and HIV: modeling adaptation to moving targets
    The Pharmacogenomics Journal, vol. 3, no. 5, Article ID 6500200, 2 pages, 2003
  35. Calcium- and Proteasome-dependent Degradation of the JNK Scaffold Protein Islet-brain 1
    Journal of Biological Chemistry, vol. 278, no. 49, pp. 48720–48726, 2003
  36. Calpain 3 cleaves filamin C and regulates its ability to interact with ?- and ?-sarcoglycans
    Muscle & Nerve, vol. 28, no. 4, pp. 472–483, 2003
  37. Proteomic signatures: Amino acid and oligopeptide compositions differentiate among phyla
    Proteins: Structure, Function, and Bioinformatics, vol. 54, no. 1, pp. 20–40, 2003
  38. CATSPER2, a human autosomal nonsyndromic male infertility gene
    European Journal of Human Genetics, vol. 11, no. 7, Article ID 5200991, 5 pages, 2003
  39. The 105th ENMC sponsored workshop: pathogenesis in the non-sarcoglycan limb-girdle muscular dystrophies, Naarden, April 12–14, 2002
    Neuromuscular Disorders, vol. 13, no. 1, pp. 80–90, 2003
  40. Journal of Muscle Research and Cell Motility, vol. 23, no. 3, pp. 255–264, 2002
  41. USH3A transcripts encode clarin-1, a four-transmembrane-domain protein with a possible role in sensory synapses
    European Journal of Human Genetics, vol. 10, no. 6, pp. 339–350, 2002
  42. Stable expression of calpain 3 from a muscle transgene in vivo: Immature muscle in transgenic mice suggests a role for calpain 3 in muscle maturation
    Proceedings of the National Academy of Sciences, vol. 99, no. 13, pp. 8874–8879, 2002
  43. A Highly Significant Association between a COMT Haplotype and Schizophrenia
    The American Journal of Human Genetics, vol. 71, no. 6, pp. 1296–1302, 2002
  44. Congenital Dyserythropoietic Anemia Type I Is Caused by Mutations in Codanin-1
    The American Journal of Human Genetics, vol. 71, no. 6, pp. 1467–1474, 2002
  45. Molecular adaptations of neuromuscular disease-associated proteins in response to eccentric exercise in human skeletal muscle
    The Journal of Physiology, vol. 543, no. 1, pp. 297–306, 2002
  46. Pharmacogenetic development of personalized medicine: Multiple sclerosis treatment as a model
    Drug News & Perspectives, vol. 15, no. 9, p. 558, 2002
  47. A New Locus for Autosomal Dominant Dilated Cardiomyopathy Identified on Chromosome 6q12-q16
    The American Journal of Human Genetics, vol. 68, no. 1, pp. 241–246, 2001
  48. Nature Genetics, vol. 29, no. 1, pp. 83–87, 2001
  49. Developmental expression of myotilin, a gene mutated in limb-girdle muscular dystrophy type 1A
    Mechanisms of Development, vol. 103, no. 1-2, pp. 121–125, 2001
  50. Pathophysiology of limb girdle muscular dystrophy type 2A: hypothesis and new insights into the IκBα/NF-κB survival pathway in skeletal muscle
    Journal of Molecular Medicine, vol. 79, no. 5-6, pp. 254–261, 2001
  51. The Region on 9p Associated with 46,XY Sex Reversal Contains Several Transcripts Expressed in the Urogenital System and a Novel Doublesex-Related Domain
    Genomics, vol. 64, no. 2, pp. 170–178, 2000
  52. A First High-Density Map of 981 Biallelic Markers on Human Chromosome 14
    Genomics, vol. 70, no. 2, pp. 153–164, 2000
  53. Secondary reduction in calpain 3 expression in patients with limb girdle muscular dystrophy type 2B and Miyoshi myopathy (primary dysferlinopathies)
    Neuromuscular Disorders, vol. 10, no. 8, pp. 553–559, 2000
  54. Calpain3 expression during human cardiogenesis
    Neuromuscular Disorders, vol. 10, no. 4-5, pp. 251–256, 2000
  55. Muscular dystrophy due to dysferlin deficiency in Libyan Jews: Clinical and genetic features
    Brain, vol. 123, no. 6, pp. 1229–1237, 2000
  56. Human-mouse differences in the embryonic expression patterns of developmental control genes and disease genes
    Human Molecular Genetics, vol. 9, no. 2, pp. 165–173, 2000
  57. Corrigendum
    Human Molecular Genetics, vol. 9, no. 4, pp. 659–659, 2000
  58. Loss of Calpain 3 Proteolytic Activity Leads to Muscular Dystrophy and to Apoptosis-associated IkappaBalpha/Nuclear Factor kappaB Pathway Perturbation in Mice
    The Journal of Cell Biology, vol. 151, no. 7, pp. 1583–1590, 2000
  59. Vacuoliting Megalencephalic Leukoencephalopathy with Subcortical Cysts, Mapped to Chromosome 22qtel
    The American Journal of Human Genetics, vol. 66, no. 2, pp. 733–739, 2000
  60. Calpainopathy—A Survey of Mutations and Polymorphisms
    The American Journal of Human Genetics, vol. 64, no. 6, pp. 1524–1540, 1999
  61. Genetic Linkage of the Muckle-Wells Syndrome to Chromosome 1q44
    The American Journal of Human Genetics, vol. 65, no. 4, pp. 1054–1059, 1999
  62. A homeobox gene, vax2, controls the patterning of the eye dorsoventral axis
    Proceedings of the National Academy of Sciences, vol. 96, no. 19, pp. 10729–10734, 1999
  63. An alpha-tectorin gene defect causes a newly identified autosomal recessive form of sensorineural pre-lingual non-syndromic deafness, DFNB21
    Human Molecular Genetics, vol. 8, no. 3, pp. 409–412, 1999
  64. Dysferlin is a plasma membrane protein and is expressed early in human development [published erratum appears in Hum Mol Genet 1999 Jun;8(6):1141]
    Human Molecular Genetics, vol. 8, no. 5, pp. 855–861, 1999
  65. Corrigendum
    Human Molecular Genetics, vol. 8, no. 6, pp. 1141–1141, 1999
  66. Disease taxonomy - monogenic muscular dystrophy
    British Medical Bulletin, vol. 55, no. 2, pp. 340–357, 1999
  67. Nature Medicine, vol. 5, no. 7, pp. 849–849, 1999
  68. A diagnostic fluorescent marker kit for six limb girdle muscular dystrophies
    Neuromuscular Disorders, vol. 9, no. 8, pp. 555–563, 1999
  69. 66th/67th ENMC Sponsored International Workshop: The Limb-Girdle Muscular Dystrophies 26–28 March 1999, Naarden, The Netherlands
    Neuromuscular Disorders, vol. 9, no. 6-7, pp. 436–445, 1999
  70. Nature Medicine, vol. 5, no. 5, pp. 503–511, 1999
  71. Nature Genetics, vol. 22, no. 2, pp. 178–181, 1999
  72. Purification and Identification of Two Putative Autolytic Sites in Human Calpain 3 (p94) Expressed in Heterologous Systems
    Archives of Biochemistry and Biophysics, vol. 363, no. 2, pp. 237–245, 1999
  73. Structure, Genetic Localization, and Identification of the Cardiac and Skeletal Muscle Transcripts of the Human Integrin α7 Gene (ITGA7),
    Biochemical and Biophysical Research Communications, vol. 260, no. 2, pp. 357–364, 1999
  74. Studies on Calpain Expression during Differentiation of Rat Satellite Cells in Primary Cultures in the Presence of Heparin or a Mimic Compound
    Experimental Cell Research, vol. 252, no. 2, pp. 392–400, 1999
  75. Autosomal dominant lateral temporal epilepsy: Clinical and genetic study of a large basque pedigree linked to chromosome 10q
    Annals of Neurology, vol. 45, no. 2, pp. 182–188, 1999
  76. Pseudometabolic expression and phenotypic variability of calpain deficiency in two siblings
    Muscle & Nerve, vol. 21, no. 8, pp. 1078–1080, 1998
  77. Recommendations for a nomenclature system for human gene mutations
    Human Mutation, vol. 11, no. 1, pp. 1–3, 1998
  78. Expression of Genes (CAPN3, SGCA, SGCB, and TTN) Involved in Progressive Muscular Dystrophies during Early Human Development
    Genomics, vol. 48, no. 2, pp. 145–156, 1998
  79. Nature Genetics, vol. 20, no. 1, pp. 37–42, 1998
  80. Targeted Disruption of the Mouse Caspase 8 Gene Ablates Cell Death Induction by the TNF Receptors, Fas/Apo1, and DR3 and Is Lethal Prenatally
    Immunity, vol. 9, no. 2, pp. 267–276, 1998
  81. β-Sarcoglycan: genomic analysis and identification of a novel missense mutation in the LGMD2E Amish isolate
    Neuromuscular Disorders, vol. 8, no. 1, pp. 30–38, 1998
  82. Limb Girdle Muscular Dystrophy Type 2A (CAPN3): Mapping Using Allelic Association
    Human Heredity, vol. 48, no. 6, pp. 333–337, 1998
  83. Limb-girdle muscular dystrophy in Guipuzcoa (Basque Country, Spain)
    Brain, vol. 121, no. 9, pp. 1735–1747, 1998
  84. Functional Defects of a Muscle-specific Calpain, p94, Caused by Mutations Associated with Limb-Girdle Muscular Dystrophy Type 2A
    Journal of Biological Chemistry, vol. 273, no. 27, pp. 17073–17078, 1998
  85. Vocal Cord and Pharyngeal Weakness with Autosomal Dominant Distal Myopathy: Clinical Description and Gene Localization to 5q31
    The American Journal of Human Genetics, vol. 63, no. 6, pp. 1732–1742, 1998
  86. Calpain-3 Deficiency Causes a Mild Muscular Dystrophy in Childhood
    Neuropediatrics, vol. 28, no. 4, pp. 212–216, 1997
  87. A susceptibility locus for early-onset non-insulin dependent (type 2) diabetes mellitus maps to chromosome 20q, proximal to the phosphoenolpyruvate carboxykinase gene
    Human Molecular Genetics, vol. 6, no. 9, pp. 1401–1408, 1997
  88. Dynamic Molecular Combing: Stretching the Whole Human Genome for High-Resolution Studies
    Science, vol. 277, no. 5331, pp. 1518–1523, 1997
  89. A biochemical, genetic, and clinical survey of autosomal recessive limb girdle muscular dystrophies in Turkey
    Annals of Neurology, vol. 42, no. 2, pp. 222–229, 1997
  90. Prenatal diagnosis of limb-girdle muscular dystrophy type 2A
    Neuromuscular Disorders, vol. 6, no. 3, pp. 173–176, 1996
  91. Molecular cloning of mouse canp3, the gene associated with limb-girdle muscular dystrophy 2A in human
    Mammalian Genome, vol. 7, no. 5, pp. 377–379, 1996
  92. Identification of muscle-specific calpain and ?-sarcoglycan genes in progressive autosomal recessive muscular dystrophies
    Neuromuscular Disorders, vol. 6, no. 6, pp. 455–462, 1996
  93. Chromosome 15-linked limb-girdle muscular dystrophy: Clinical phenotypes in Reunion Island and French metropolitan communities
    Neuromuscular Disorders, vol. 6, no. 6, pp. 447–453, 1996
  94. Bases moléculaires des dystrophies musculaires progressives à transmission autosomique récessive
    Annales de l'Institut Pasteur/Actualités, vol. 7, no. 3, pp. 157–171, 1996
  95. A founder mutation in the gamma-sarcoglycan gene of gypsies possibly predating their migration out of India
    Human Molecular Genetics, vol. 5, no. 12, pp. 2019–2022, 1996
  96. Juvenile limb-girdle muscular dystrophy
    Brain, vol. 119, no. 1, pp. 295–308, 1996
  97. Advances in the molecular genetics of the limb-girdle type of autosomal recessive progressive muscular dystrophy
    Current Opinion in Neurology, vol. 9, no. 5, p. 389, 1996
  98. A Gene Map of the Human Genome
    Science, vol. 274, no. 5287, pp. 540–546, 1996
  99. A gene for maturity onset diabetes of the young (MODY) maps to chromosome 12q
    Nature Genetics, vol. 9, no. 4, Article ID ng0495-418, 5 pages, 1995
  100. How neutral are synonymous codon mutations?
    Nature Genetics, vol. 10, no. 3, Article ID ng0795-259, 1 pages, 1995
  101. β–sarcoglycan: characterization and role in limb–girdle muscular dystrophy linked to 4q12
    Nature Genetics, vol. 11, no. 3, Article ID ng1195-257, 8 pages, 1995
  102. Cardiac myosin binding protein–C gene splice acceptor site mutation is associated with familial hypertrophic cardiomyopathy
    Nature Genetics, vol. 11, no. 4, Article ID ng1295-438, 2 pages, 1995
  103. An STS map of the limb girdle muscular dystrophy type 2A region
    Mammalian Genome, vol. 6, no. 10, pp. 754–756, 1995
  104. Mutations in the proteolytic enzyme calpain 3 cause limb-girdle muscular dystrophy type 2A
    Cell, vol. 81, no. 1, pp. 27–40, 1995
  105. Genetic mapping of the spinocerebellar ataxia 2 (SCA2) locus on chromosome 12q23–q24.1
    Genomics, vol. 25, no. 2, pp. 433–435, 1995
  106. Diagnostic criteria for the limb-girdle muscular dystrophies: report of the ENMC consortium on limb-girdle dystrophies
    Neuromuscular Disorders, vol. 5, no. 1, pp. 71–74, 1995
  107. 30th and 31st ENMC international workshops, Naarden, The Netherlands, Held 6–8 January 1995
    Neuromuscular Disorders, vol. 5, no. 4, pp. 337–343, 1995
  108. How is it that microsatellites and random oligonucleotides uncover DNA fingerprint patterns?
    Mammalian Genome, vol. 5, no. 9, pp. 525–530, 1994
  109. Missense mutations in the adhalin gene linked to autosomal recessive muscular dystrophy
    Cell, vol. 78, no. 4, pp. 625–633, 1994
  110. Targeted Development of Microsatellite Markers from Inter-Alu Amplification of YAC Clones
    Genomics, vol. 19, no. 2, pp. 391–393, 1994
  111. The Gene for the TATA Binding Protein (TBP) That Contains a Highly Polymorphic Protein Coding CAG Repeat Maps to 6q27
    Genomics, vol. 21, no. 3, pp. 667–668, 1994
  112. Refined Mapping of a Gene (NPH1) Causing Familial Juvenile Nephronophthisis and Evidence for Genetic Heterogeneity
    Genomics, vol. 22, no. 2, pp. 296–301, 1994
  113. Regional Localization of Human Chromosome 15 Loci
    Genomics, vol. 23, no. 3, pp. 619–627, 1994
  114. The Gene for Creatine Kinase, Mitochondrial 2 (Sarcomeric; CKMT2), Maps to Chromosome 5q13.3
    Genomics, vol. 18, no. 1, pp. 134–136, 1993
  115. DNA segments mapped by reciprocal use of microsatellite primers between mouse and rat
    Mammalian Genome, vol. 4, no. 10, pp. 571–576, 1993
  116. Mapping of a novel gene for familial hypertrophic cardiomyopathy to chromosome 11
    Nature Genetics, vol. 4, no. 3, Article ID ng0793-311, 2 pages, 1993
  117. A gene for familial juvenile nephronophthisis (recessive medullary cystic kidney disease) maps to chromosome 2p
    Nature Genetics, vol. 3, no. 4, Article ID ng0493-342, 3 pages, 1993
  118. Genetic determinants of diastolic and pulse pressure map to different loci in Lyon hypertensive rats
    Nature Genetics, vol. 3, no. 4, Article ID ng0493-354, 3 pages, 1993
  119. Familial Hyperglycemia Due to Mutations in Glucokinase -- Definition of a Subtype of Diabetes Mellitus
    New England Journal of Medicine, vol. 328, no. 10, pp. 697–702, 1993
  120. Familial hypertrophic cardiomyopathy. Microsatellite haplotyping and identification of a hot spot for mutations in the beta-myosin heavy chain gene.
    Journal of Clinical Investigation, vol. 92, no. 6, pp. 2807–2813, 1993
  121. Close linkage of glucokinase locus on chromosome 7p to early-onset non-insulin-dependent diabetes mellitus
    Nature, vol. 356, no. 6365, Article ID 356162a0, 2 pages, 1992
  122. Mapping of two chromosome 15 microsatellites
    Genomics, vol. 13, no. 3, pp. 903–904, 1992
  123. Survey of human and rat microsatellites
    Genomics, vol. 12, no. 4, pp. 627–631, 1992
  124. Chromosomal mapping of two genetic loci associated with blood-pressure regulation in hereditary hypertensive rats
    Nature, vol. 353, no. 6344, Article ID 353521a0, 8 pages, 1991
  125. Oligonucleotide Polymorphisms: A New Tool for Genomic Genetics
    Bio/Technology, vol. 6, no. 9, Article ID nbt0988-1061, 3 pages, 1988
  126. Elevated amounts of methotrexate-binding protein, different from normal dihydrofolate reductase, in a petunia MTXR-cell line
    Plant Molecular Biology, vol. 8, no. 1, pp. 87–94, 1987